Re: using StarCluster with R and Rmpi
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On 10/26/2010 04:54 PM, Justin Riley wrote:
> OK so it sounds like this *could* be a compile issue although that's
> hard to tell without the installation log. Would you mind sending the
> output from the installation using the "R CMD INSTALL" method?
Just found this old post from Rmpi mailing list:
Might give this a try when calling mpirun:
user_at_master $ export R_PROFILE=/usr/lib/R/site-library/Rmpi/Rprofile
user_at_master $ mpirun -n 4 --hostfile hostfile R CMD BATCH load.R
Need to check that the R_PROFILE path actually exists, but I'm curious
if this helps at all...
Received on Tue Oct 26 2010 - 17:01:25 EDT